ClawBio
@ClawBio Organization
Public Skills
ukb-navigator
by ClawBio
Semantic search across UK Biobank's 12,000+ data fields and publications — find the right variables for your research question.
genome-compare
by ClawBio
Compare your genome to George Church (PGP-1) and estimate ancestry composition via IBS and EM admixture
clinpgx
by ClawBio
Query the ClinPGx API for pharmacogenomic gene-drug data, clinical annotations, CPIC guidelines, and FDA drug labels
vcf-annotator
by ClawBio
Annotate VCF variants with VEP, ClinVar, gnomAD frequencies, and ancestry-aware context. Generates prioritised variant reports.
scrna-orchestrator
by ClawBio
Automate single-cell RNA-seq analysis with Scanpy or Seurat. QC, normalisation, clustering, DE analysis, and visualisation.
bio-orchestrator
by ClawBio
Meta-agent that routes bioinformatics requests to specialised sub-skills. Handles file type detection, analysis planning, report generation, and reproducibility export.
struct-predictor
by ClawBio
Local protein structure prediction with AlphaFold, Boltz, or Chai. Compare predicted structures, compute RMSD, visualise 3D models.
equity-scorer
by ClawBio
Compute HEIM diversity and equity metrics from VCF or ancestry data. Generates heterozygosity, FST, PCA plots, and a composite HEIM Equity Score with markdown reports.
claw-semantic-sim
by ClawBio
Semantic Similarity Index for disease research literature using PubMedBERT embeddings
drug-photo
by ClawBio
Medication photo to personalised PGx dosage card via Claude vision — snap a pill, get genotype-informed guidance
pharmgx-reporter
by ClawBio
Pharmacogenomic report from DTC genetic data (23andMe/AncestryDNA) — 12 genes, 31 SNPs, 51 drugs
profile-report
by ClawBio
Unified personal genomic profile report — reads a PatientProfile JSON and synthesizes all skill results into a single "Your Genomic Profile" document.
gwas-lookup
by ClawBio
Federated variant lookup across 9 genomic databases — GWAS Catalog, Open Targets, PheWeb (UKB, FinnGen, BBJ), GTEx, eQTL Catalogue, and more.
seq-wrangler
by ClawBio
Sequence QC, alignment, and BAM processing. Wraps FastQC, BWA/Bowtie2, SAMtools for automated read-to-BAM pipelines.
repro-enforcer
by ClawBio
Export any bioinformatics analysis as a reproducible bundle with Conda environment, Singularity container definition, and Nextflow pipeline.
NutriGx Advisor — Personalised Nutrition from Genetic Data
by ClawBio
an issue tagging him in the main ClawBio repository.