pluginagentmarketplace

testing-quality

pytest, data validation, Great Expectations, and quality assurance for data systems

pluginagentmarketplace 5 1 Updated 9mo ago

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Install

npx skillscat add pluginagentmarketplace/custom-plugin-data-engineer/testing-quality

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About this skill

This skill provides testing and data validation capabilities using pytest and Great Expectations for data systems. It enables developers to create unit tests, validate data quality, and implement quality assurance practices. Agents should use it when building data pipelines, validating data integrity, or establishing CI/CD testing workflows for data applications.

SKILL.md

Testing & Data Quality

Production testing strategies with pytest, data validation, and quality frameworks.

Quick Start

import pytest
from unittest.mock import Mock, patch
import pandas as pd

# Fixtures for test data
@pytest.fixture
def sample_dataframe():
    return pd.DataFrame({
        "id": [1, 2, 3],
        "name": ["Alice", "Bob", "Charlie"],
        "amount": [100.0, 200.0, 300.0]
    })

@pytest.fixture
def mock_database():
    with patch("app.db.connection") as mock:
        mock.query.return_value = [{"id": 1, "value": 100}]
        yield mock

# Unit test with AAA pattern
class TestDataTransformer:

    def test_calculates_total_correctly(self, sample_dataframe):
        # Arrange
        transformer = DataTransformer()

        # Act
        result = transformer.calculate_total(sample_dataframe)

        # Assert
        assert result == 600.0

    def test_handles_empty_dataframe(self):
        # Arrange
        empty_df = pd.DataFrame()
        transformer = DataTransformer()

        # Act & Assert
        with pytest.raises(ValueError, match="Empty dataframe"):
            transformer.calculate_total(empty_df)

    @pytest.mark.parametrize("input_val,expected", [
        (100, 110),
        (0, 0),
        (-50, -55),
    ])
    def test_apply_tax(self, input_val, expected):
        result = apply_tax(input_val, rate=0.10)
        assert result == expected

Core Concepts

1. Data Validation with Pydantic

from pydantic import BaseModel, Field, field_validator
from datetime import datetime
from typing import Optional

class DataRecord(BaseModel):
    id: str = Field(..., min_length=1)
    amount: float = Field(..., ge=0)
    timestamp: datetime
    category: Optional[str] = None

    @field_validator("id")
    @classmethod
    def validate_id_format(cls, v):
        if not v.startswith("REC-"):
            raise ValueError("ID must start with 'REC-'")
        return v

    @field_validator("amount")
    @classmethod
    def round_amount(cls, v):
        return round(v, 2)

# Validation
def process_records(raw_data: list[dict]) -> list[DataRecord]:
    valid_records = []
    for item in raw_data:
        try:
            record = DataRecord(**item)
            valid_records.append(record)
        except ValidationError as e:
            logger.warning(f"Invalid record: {e}")
    return valid_records

2. Great Expectations

import great_expectations as gx
from great_expectations.checkpoint import Checkpoint

# Initialize context
context = gx.get_context()

# Create expectations
validator = context.sources.pandas_default.read_csv("data/orders.csv")

# Column expectations
validator.expect_column_to_exist("order_id")
validator.expect_column_values_to_not_be_null("order_id")
validator.expect_column_values_to_be_unique("order_id")

# Value expectations
validator.expect_column_values_to_be_between("amount", min_value=0, max_value=10000)
validator.expect_column_values_to_be_in_set("status", ["pending", "completed", "cancelled"])

# Pattern matching
validator.expect_column_values_to_match_regex("email", r"^[\w\.-]+@[\w\.-]+\.\w+$")

# Run validation
results = validator.validate()

if not results.success:
    failed_expectations = [r for r in results.results if not r.success]
    raise DataQualityError(f"Validation failed: {failed_expectations}")

3. Integration Testing

import pytest
from testcontainers.postgres import PostgresContainer
from sqlalchemy import create_engine

@pytest.fixture(scope="module")
def postgres_container():
    """Spin up real Postgres for integration tests."""
    with PostgresContainer("postgres:16-alpine") as postgres:
        yield postgres

@pytest.fixture
def db_engine(postgres_container):
    """Create engine with test database."""
    engine = create_engine(postgres_container.get_connection_url())

    # Setup schema
    with engine.connect() as conn:
        conn.execute(text("CREATE TABLE users (id SERIAL PRIMARY KEY, name TEXT)"))
        conn.commit()

    yield engine

    # Cleanup
    engine.dispose()

class TestDatabaseOperations:

    def test_insert_and_query(self, db_engine):
        # Arrange
        repo = UserRepository(db_engine)

        # Act
        repo.insert(User(name="Test User"))
        users = repo.get_all()

        # Assert
        assert len(users) == 1
        assert users[0].name == "Test User"

    def test_transaction_rollback(self, db_engine):
        repo = UserRepository(db_engine)

        with pytest.raises(IntegrityError):
            repo.insert(User(name=None))  # Violates constraint

        # Verify rollback
        assert repo.count() == 0

4. Mocking External Services

from unittest.mock import Mock, patch, MagicMock
import responses

class TestAPIClient:

    @responses.activate
    def test_fetch_data_success(self):
        # Mock HTTP response
        responses.add(
            responses.GET,
            "https://api.example.com/data",
            json={"items": [{"id": 1}]},
            status=200
        )

        client = APIClient()
        result = client.fetch_data()

        assert len(result["items"]) == 1

    @responses.activate
    def test_handles_api_error(self):
        responses.add(
            responses.GET,
            "https://api.example.com/data",
            json={"error": "Server error"},
            status=500
        )

        client = APIClient()

        with pytest.raises(APIError):
            client.fetch_data()

    @patch("app.services.external_api")
    def test_with_mock_service(self, mock_api):
        mock_api.get_user.return_value = {"id": 1, "name": "Test"}

        result = process_user_data(user_id=1)

        mock_api.get_user.assert_called_once_with(1)
        assert result["name"] == "Test"

Tools & Technologies

Tool Purpose Version (2025)
pytest Testing framework 8.0+
Great Expectations Data validation 0.18+
Pydantic Data validation 2.5+
pytest-cov Code coverage 4.1+
testcontainers Integration testing 3.7+
responses HTTP mocking 0.25+
hypothesis Property-based testing 6.98+

Troubleshooting Guide

Issue Symptoms Root Cause Fix
Flaky Tests Random failures Shared state, timing Isolate tests, use fixtures
Slow Tests Long test runs No mocking, real I/O Mock external services
Low Coverage Uncovered code Missing edge cases Add parametrized tests
Test Data Issues Inconsistent results Hardcoded data Use factories/fixtures

Best Practices

# ✅ DO: Use fixtures for setup
@pytest.fixture
def client():
    return TestClient(app)

# ✅ DO: Test edge cases
@pytest.mark.parametrize("input_data", [None, [], {}, ""])
def test_handles_empty_input(input_data):
    assert process(input_data) == default_result

# ✅ DO: Name tests descriptively
def test_user_creation_fails_with_invalid_email():
    ...

# ✅ DO: Use marks for slow tests
@pytest.mark.slow
def test_full_pipeline():
    ...

# ❌ DON'T: Test implementation details
# ❌ DON'T: Share state between tests
# ❌ DON'T: Skip error path testing

Resources


Skill Certification Checklist:

  • Can write unit tests with pytest
  • Can use fixtures and parametrization
  • Can implement data validation
  • Can write integration tests
  • Can mock external dependencies