Context Manager

Manage the Claude Code memory hierarchy and audit the full markdown landscape of a project. Produces well-organised memory files, detects documentation overlap, and reports the total context footprint.

Four Context Layers

Layer	Location	Purpose	What this skill does
Memory	./CLAUDE.md, subdirs, .claude/rules/*.md	Project context, commands, architecture, rules	Audit, score, maintain
Project docs	ARCHITECTURE.md, DATABASE_SCHEMA.md, API_ENDPOINTS.md, docs/**/*.md	Technical documentation	Check existence per project type, flag staleness, detect CLAUDE.md overlap
Session	SESSION.md, PROJECT_BRIEF.md	Temporary progress tracking	Report presence + size (managed by dev-session)
Public	README.md, CONTRIBUTING.md, other root .md	Public-facing docs	Detect CLAUDE.md duplication

Auto-memory (~/.claude/projects/*/memory/MEMORY.md) is also scanned for awareness but managed by Claude automatically.

Operating Modes

Mode 1: Session Capture

When: End of session, "capture learnings", "update CLAUDE.md with what we learned"

1. Review the conversation for discoveries worth preserving:
   • Commands that worked (or didn't)
   • Gotchas and workarounds found
   • Architecture decisions made
   • Configuration quirks discovered
   • Patterns that would help future sessions
2. Categorise each discovery using the placement decision tree below
3. Draft all changes as diffs in a single batch
4. Present the batch — apply after a single yes/no confirmation

Keep it concise: one line per concept. No verbose explanations, no generic advice.

Mode 2: Full Audit

When: "audit context", "audit memory", "check project docs", periodic maintenance, working in a neglected project

1. Run the audit script:

   python3 skills/context-manager/scripts/audit_memory.py [repo-path]

2. Review the output:
   • Memory layer: CLAUDE.md sizes, quality scores, rules file sizes
   • Project docs: existence, staleness, overlap with CLAUDE.md
   • Session/public: presence and size
   • Markdown footprint: total KB by layer
   • Overlap warnings: sections duplicated between files
3. Generate changes autonomously — create, update, or flag files as needed
4. Present all changes as a single batch for approval
5. Apply approved changes

For large repos, delegate to a sub-agent:

Task(subagent_type: "general-purpose",
  prompt: "Run python3 skills/context-manager/scripts/audit_memory.py /path/to/repo
           and summarise the findings.")

Mode 3: Restructure

When: "restructure memory", root CLAUDE.md over 200 lines, first-time memory setup

1. Run full audit (Mode 2) first
2. Split oversized files:
   • Extract topic sections from root CLAUDE.md into .claude/rules/<topic>.md
   • Extract directory-specific content into sub-directory CLAUDE.md files
   • Move detailed technical content from CLAUDE.md to docs/ or ARCHITECTURE.md if it's reference material, not operational context
3. Resolve overlaps: if CLAUDE.md duplicates ARCHITECTURE.md or docs/, remove the duplication
4. Create missing documentation files based on project type
5. Present the restructure plan, apply after approval

Placement Decision Tree

Would this still apply if I switched to a completely different project?
├── YES → ~/.claude/rules/<topic>.md
│         (correction rules, API patterns, coding standards)
└── NO  → Is it specific to a subdirectory?
    ├── YES → <dir>/CLAUDE.md
    │         (integrations, directory-specific gotchas)
    └── NO  → Is it reference documentation or operational context?
        ├── Reference → ARCHITECTURE.md or docs/
        │               (system design, schemas, detailed flows)
        └── Operational → ./CLAUDE.md (project root)
                          (identity, stack, commands, critical rules)

Size Targets

File Type	Target	Maximum
Root CLAUDE.md	50-150 lines	200
Sub-directory CLAUDE.md	15-50 lines	80
Rules topic file	20-80 lines	120

What Belongs Where

Root CLAUDE.md

• Project name, purpose, owner
• Tech stack summary
• Build/deploy/test commands (copy-paste ready)
• Directory structure overview
• Critical "never do X" rules
• Key integrations and secrets locations

Sub-directory CLAUDE.md

• External service integrations for that component
• Non-obvious configuration specific to this area
• Directory-specific commands
• Gotchas when working in this directory

Don't create when: parent covers it, directory is self-explanatory, content would be under 10 lines.

.claude/rules/ topic files

• Correction rules bridging training cutoff (e.g. API changes, deprecated patterns)
• Coding patterns and standards
• Platform-specific formatting rules
• Error prevention patterns

docs/ and ARCHITECTURE.md

• Detailed system architecture (component diagrams, data flows)
• Database schemas and migration guides
• API endpoint catalogues
• Content that Claude should read on demand, not every session

Rule of thumb: If it's needed every session, put it in CLAUDE.md. If it's reference material consulted occasionally, put it in docs/.

What to delete

• Content Claude already knows from training
• Verbose explanations of standard frameworks
• Changelogs or version history (use git)
• Duplicated content (between CLAUDE.md and docs/, ARCHITECTURE.md, or README.md)
• "TODO" items that were never completed
• Generic advice not specific to the project

Project Type Detection

The audit script detects project type from file presence and suggests appropriate documentation:

Indicator	Type	Suggested Docs
wrangler.jsonc / wrangler.toml	Cloudflare Worker	ARCHITECTURE.md
vite.config.* + .tsx files	Vite/React	ARCHITECTURE.md
next.config.*	Next.js	ARCHITECTURE.md
MCP patterns in src/index.ts	MCP Server	ARCHITECTURE.md, API_ENDPOINTS.md
src/routes/ or src/api/	API Project	API_ENDPOINTS.md, DATABASE_SCHEMA.md
Drizzle/Prisma config	Database	DATABASE_SCHEMA.md

All projects get CLAUDE.md. Additional docs only when the project type warrants them. See references/project-types.md for full detection heuristics and doc templates.

Autonomy Rules

• Just do it: Run audit, detect project type, identify gaps, draft changes
• Brief confirmation: Apply changes (single batch yes/no, not item-by-item)
• Ask first: Delete existing content, major restructures (moving 50+ lines), create new project docs from scratch where there's ambiguity about content

Quality Scoring

The audit script scores each CLAUDE.md on 6 criteria (100 points):

Criterion	Points	What it measures
Commands/Workflows	20	Build, test, deploy documented
Architecture Clarity	20	Structure, relationships, entry points
Non-Obvious Patterns	15	Gotchas, quirks, warnings
Conciseness	15	Dense content, no filler
Currency	15	References valid, commands work
Actionability	15	Copy-paste ready, real paths

See references/quality-criteria.md for the full rubric.

Reference Files

When	Read
Scoring CLAUDE.md quality	references/quality-criteria.md
Detecting project type and expected docs	references/project-types.md
Creating new CLAUDE.md or rules files	references/templates.md

Scripts

• scripts/audit_memory.py — Scan all four layers, score quality, detect project type, report footprint and overlap
  • python3 audit_memory.py [repo-path] — human-readable report
  • python3 audit_memory.py [repo-path] --json — structured JSON output