Testing
Unit tests, integration tests, test automation
bio-alignment-files-bam-statistics
by GPTomics
Generate alignment statistics using samtools flagstat, stats, depth, and coverage. Use when assessing alignment quality, calculating coverage, or generating QC reports.
bio-sashimi-plots
by GPTomics
Creates sashimi plots showing RNA-seq read coverage and splice junction counts using ggsashimi or rmats2sashimiplot. Visualizes differential splicing events with grouped samples and junction read support. Use when visualizing specific splicing events or validating differential splicing results.
bio-causal-genomics-colocalization-analysis
by GPTomics
Test whether two traits share a causal variant at a genomic locus using Bayesian colocalization with coloc. Computes posterior probabilities for shared vs distinct causal variants between GWAS and eQTL signals. Use when determining if a GWAS signal and an eQTL share the same causal variant.
bio-causal-genomics-mediation-analysis
by GPTomics
Decompose genetic effects into direct and indirect paths through mediating variables using the mediation R package. Tests whether gene expression, methylation, or other molecular phenotypes mediate the effect of genetic variants on disease. Use when testing whether a molecular phenotype mediates the genotype-to-phenotype relationship.
bio-causal-genomics-pleiotropy-detection
by GPTomics
Detect and correct for horizontal pleiotropy in Mendelian randomization analyses using MR-PRESSO for outlier removal, MR-Egger regression for directional pleiotropy, and Steiger filtering for variant directionality. Use when validating MR results, detecting pleiotropic instruments, or running sensitivity analyses for causal inference.
bio-causal-genomics-mendelian-randomization
by GPTomics
Estimate causal effects between exposures and outcomes using genetic variants as instrumental variables with TwoSampleMR. Implements IVW, MR-Egger, weighted median, and MR-PRESSO methods for robust causal inference from GWAS summary statistics. Use when testing whether an exposure causally affects an outcome using genetic instruments.
regression-bisect
by jmagly
@.claude/agents/debugger.md
parallel-dispatch
by jmagly
Result schema: schemas/dispatch-result.schema.json
regression-report
by jmagly
@agentic/code/frameworks/sdlc-complete/agents/metrics-analyst.md
gate-evaluation
by jmagly
Validator agents: agents/
sdlc-reports
by jmagly
Dashboard guide: docs/dashboard-configuration.md
content-driven-development
by adobe
Apply a Content Driven Development process to AEM Edge Delivery Services development. Use for ALL code changes - new blocks, block modifications, CSS styling, bug fixes, core functionality (scripts.js, styles, etc.), or any JavaScript/CSS work that needs validation.
Bun Test Lifecycle
by secondsky
Use for test lifecycle hooks: beforeAll, afterAll, beforeEach, afterEach, fixtures, preload.
Bun Jest Migration
by secondsky
Use when migrating from Jest to Bun's test runner, import compatibility, mocks, and config.
Bun Test Basics
by secondsky
Use for bun:test syntax, assertions, describe/it, test.skip/only/each, and basic patterns.
SKILL.md
by owasp-dep-scan
For WASM parsing changes, verify both normalized fields (imports, dynamic_entries, functions) and raw passthrough fields (wasm_report, wasm_analysis).
architect-diagnose-test-flakes
by iterate
Diagnose flaky tests and unstable CI behavior.
specalign
by NeverSight
Align spec files with implementation. Detects drift between spec and code, surfaces discrepancies, user decides whether to update spec or code. Use when both a spec file and its implementation are in context.
data-driven-testing
by NeverSight
"DEPRECATED: Use testing-best-practices instead. This skill has been retired."
ecpay
by paid-tw
Provides ECPay (綠界科技) integration guide including payment setup and electronic invoice integration. Use when integrating ECPay payment gateway or e-invoice features.
project-specification
by athola
"Transform project briefs into testable specifications with acceptance criteria. Use for requirements translation, spec creation, pre-implementation. Skip if spec exists or still exploring."
architecture-paradigm-functional-core
by athola
'Functional Core, Imperative Shell: isolate deterministic logic from
makefile-dogfooder
by athola
'Use this skill BEFORE releasing any plugin to verify Makefile coverage.
methodology-curator
by athola
Surfaces expert frameworks and proven methodologies before creating OR