Docs Gen
Generate and maintain documentation
gpui-element
by longbridge
Implementing custom elements using GPUI's low-level Element API (vs. high-level Render/RenderOnce APIs). Use when you need maximum control over layout, prepaint, and paint phases for complex, performance-critical custom UI components that cannot be achieved with Render/RenderOnce traits.
adaptyv
by K-Dense-AI
Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or protein sequence optimization. Also use for submitting experiments via API, tracking experiment status, downloading results, optimizing protein sequences for better expression using computational tools (NetSolP, SoluProt, SolubleMPNN, ESM), or managing protein design workflows with wet-lab validation.
ena-database
by K-Dense-AI
Access European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.
esm
by K-Dense-AI
Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representations). Use this skill when working with protein sequences, structures, or function prediction; designing novel proteins; generating protein embeddings; performing inverse folding; or conducting protein engineering tasks. Supports both local model usage and cloud-based Forge API for scalable inference.
fred-economic-data
by K-Dense-AI
Query FRED (Federal Reserve Economic Data) API for 800,000+ economic time series from 100+ sources. Access GDP, unemployment, inflation, interest rates, exchange rates, housing, and regional data. Use for macroeconomic analysis, financial research, policy studies, economic forecasting, and academic research requiring U.S. and international economic indicators.
gwas-database
by K-Dense-AI
Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.
datacommons-client
by K-Dense-AI
Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statistics, environmental data, or any public datasets available through Data Commons. Applicable for querying population statistics, GDP figures, unemployment rates, disease prevalence, geographic entity resolution, and exploring relationships between statistical entities.
clinpgx-database
by K-Dense-AI
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
clinicaltrials-database
by K-Dense-AI
Query ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data, for clinical research and patient matching.
cbioportal-database
by K-Dense-AI
Query cBioPortal for cancer genomics data including somatic mutations, copy number alterations, gene expression, and survival data across hundreds of cancer studies. Essential for cancer target validation, oncogene/tumor suppressor analysis, and patient-level genomic profiling.
gene-database
by K-Dense-AI
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
alpha-vantage
by K-Dense-AI
Access real-time and historical stock market data, forex rates, cryptocurrency prices, commodities, economic indicators, and 50+ technical indicators via the Alpha Vantage API. Use when fetching stock prices (OHLCV), company fundamentals (income statement, balance sheet, cash flow), earnings, options data, market news/sentiment, insider transactions, GDP, CPI, treasury yields, gold/silver/oil prices, Bitcoin/crypto prices, forex exchange rates, or calculating technical indicators (SMA, EMA, MACD, RSI, Bollinger Bands). Requires a free API key from alphavantage.co.
数学建模技能 - Math Modeling
by XiaoMaColtAI
数学建模技能 - 为CUMCM、MCM/ICM等数学建模竞赛提供结构化的三阶段工作流程：建模分析、代码实现、论文撰写。包含丰富的算法资源库(优化/预测/评价/图论/机器学习等)、角色指导文档、论文模板和实用工具脚本。
Scaffold Exercises
by mattpocock
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did-reviewer
by brycewang-stanford
双重差分(DID)实证审查Skill。做DID分析前必须检查平行趋势假设、画图可视化、报告违背情况。触发词：DID审查/双重差分检查/平行趋势/DiD reviewer/difference-in-differences
counterexample-explainer
by ArabelaTso
Explain why counterexamples violate specifications by analyzing formal specifications (temporal logic, invariants, pre/postconditions, code contracts), informal requirements (user stories, acceptance criteria), test specifications (assertions, property-based tests), and providing step-by-step traces showing state changes, comparing expected vs actual behavior, identifying root causes, and assessing violation impact. Use when debugging test failures, understanding model checker output, explaining runtime assertion violations, analyzing static analysis warnings, or teaching specification concepts. Produces structured markdown explanations with traces, comparisons, state diagrams, and cause chains. Triggers when users ask why something failed, explain a violation, understand a counterexample, debug a specification, or analyze why a test fails.
code-summarizer
by ArabelaTso
Generate concise summaries of source code at multiple scales. Use when users ask to summarize, explain, or understand code - whether it's a single function, a class, a module, or an entire codebase. Handles function-level code by explaining intention and core logic, and large codebases by providing high-level overviews with drill-down capabilities for specific modules.
code-comment-generator
by ArabelaTso
Generates meaningful comments and documentation for code to improve maintenance and readability. Use when adding documentation to Python or Java code, including function/method docstrings, class documentation, inline explanations for complex logic, and code annotations (TODO, FIXME). Analyzes existing comment style in the codebase to match conventions. Produces clear, concise comments that explain the "why" not just the "what", following best practices for each language.
change-log-generator
by ArabelaTso
Automatically generates change logs from git commits, patches, and pull requests. Use when preparing software releases, creating version summaries, or maintaining CHANGELOG.md files. Analyzes commit messages (including conventional commits), diff/patch files, and PR data to produce categorized Markdown change logs organized by type (Features, Bug Fixes, Breaking Changes, etc.). Ideal for release notes, version updates, and automated changelog maintenance.
component-boundary-identifier
by ArabelaTso
Identifies boundaries between modules or components in software systems through static code analysis and dependency detection. Use when Claude needs to analyze software architecture, identify module boundaries, detect boundary violations, find circular dependencies, or assess component coupling. Supports Python (packages and imports) and Java (packages and dependencies). Trigger when users ask to "identify boundaries", "find component boundaries", "detect boundary violations", "analyze module structure", "check architecture", or "find circular dependencies".
api-documentation-generator
by ArabelaTso
Generate comprehensive API documentation from repository sources including OpenAPI specs, code comments, docstrings, and existing documentation. Use when documenting APIs, creating API reference guides, or summarizing API functionality from codebases. Extracts endpoint details, request/response schemas, authentication methods, and generates code examples. Triggers when users ask to document APIs, generate API docs, create API reference, or summarize API endpoints from a repository.
api-design-assistant
by ArabelaTso
Design and review APIs with suggestions for endpoints, parameters, return types, and best practices. Use when designing new APIs from requirements, reviewing existing API designs, generating API documentation, or getting implementation guidance. Supports REST APIs with focus on endpoint structure, request/response schemas, authentication, pagination, filtering, versioning, and OpenAPI specifications. Triggers when users ask to design, review, document, or improve APIs.
fpf:actualize
by NeoLabHQ
"Reconcile the project's FPF state with recent repository changes"
fpf:decay
by NeoLabHQ
"Manage evidence freshness by identifying stale decisions and providing governance actions"