Processing
Data transformation and parsing
positron-qa-verify
by posit-dev
Generates clear, actionable verification guides for QA testing of Positron bug fixes and features
infographic-creator
by antvis
基于给定文字内容创建精美信息图。当用户请求创建信息图时使用。
single-cell-multi-omics-integration
by Starlitnightly
Quick-reference sheet for OmicVerse tutorials spanning MOFA, GLUE pairing, SIMBA integration, TOSICA transfer, and StaVIA cartography.
bulktrajblend-trajectory-interpolation
by Starlitnightly
Extend scRNA-seq developmental trajectories with BulkTrajBlend by generating intermediate cells from bulk RNA-seq, training beta-VAE and GNN models, and interpolating missing states.
bulk-rna-seq-deconvolution-with-bulk2single
by Starlitnightly
Turn bulk RNA-seq cohorts into synthetic single-cell datasets using omicverse's Bulk2Single workflow for cell fraction estimation, beta-VAE generation, and quality control comparisons against reference scRNA-seq.
single2spatial-spatial-mapping
by Starlitnightly
Map scRNA-seq atlases onto spatial transcriptomics slides using omicverse's Single2Spatial workflow for deep-forest training, spot-level assessment, and marker visualisation.
fastq-analysis-pipeline
by Starlitnightly
Guide through omicverse's alignment module for SRA downloading, FASTQ quality control, STAR alignment, gene quantification, and single-cell kallisto/bustools pipelines covering both bulk and single-cell RNA-seq workflows.
single-cell-preprocessing-with-omicverse
by Starlitnightly
Walk through omicverse's single-cell preprocessing tutorials to QC PBMC3k data, normalise counts, detect HVGs, and run PCA/embedding pipelines on CPU, CPUâGPU mixed, or GPU stacks.
bulk-wgcna-analysis-with-omicverse
by Starlitnightly
Assist Claude in running PyWGCNA through omicverse—preprocessing expression matrices, constructing co-expression modules, visualising eigengenes, and extracting hub genes.
data-transform
by Starlitnightly
Transform, clean, reshape, and preprocess data using pandas and numpy. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
spatial-transcriptomics-tutorials-with-omicverse
by Starlitnightly
Guide users through omicverse's spatial transcriptomics tutorials covering preprocessing, deconvolution, and downstream modelling workflows across Visium, Visium HD, Stereo-seq, and Slide-seq datasets.
data-viz-plots
by Starlitnightly
Create publication-quality plots and visualizations using matplotlib and seaborn. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
gsea-enrichment-analysis
by Starlitnightly
Gene set enrichment analysis with correct geneset format handling. Critical guidance for loading pathway databases and running enrichment in OmicVerse.
internal-email-composer
by OneWave-AI
Casual but professional tone for team communication. Uses company-specific terminology with scannable format.
TanStack Query
by exceptionless
Data fetching and caching with TanStack Query in Svelte. Query patterns, mutations, cache invalidation, WebSocket-driven updates, and optimistic updates. Keywords: createQuery, createMutation, TanStack Query, query keys, cache invalidation, optimistic updates, refetch, stale time, @exceptionless/fetchclient, WebSocket
Security Principles
by exceptionless
Security best practices for the Exceptionless codebase. Secrets management, input validation, secure defaults, and avoiding common vulnerabilities. Keywords: security, secrets, encryption, PII, logging, input validation, secure defaults, environment variables, OWASP, cryptography
Backend Testing
by exceptionless
Backend testing with xUnit, Foundatio.Xunit, integration tests with AppWebHostFactory, FluentClient, ProxyTimeProvider for time manipulation, and test data builders. Keywords: xUnit, Fact, Theory, integration tests, AppWebHostFactory, FluentClient, ProxyTimeProvider, TimeProvider, Foundatio.Xunit, TestWithLoggingBase, test data builders
schema-designer
by clidey
Help design database schemas, create tables, and plan data models. Activates when users ask to create tables, design schemas, or model data relationships.
whodb
by clidey
Database operations including querying, schema exploration, and data analysis. Activates for tasks involving PostgreSQL, MySQL, MariaDB, SQLite, MongoDB, Redis, Elasticsearch, or ClickHouse databases.
excalidraw
by ooiyeefei
Generate architecture diagrams as .excalidraw files from codebase analysis, with optional PNG/SVG export. Use when the user asks to create architecture diagrams, system diagrams, visualize codebase structure, generate excalidraw files, export excalidraw diagrams to PNG or SVG, or convert .excalidraw files to image formats.
superlocalmemory
by qualixar
"AI agent memory with mathematical foundations. Store, recall, search, and manage memories locally with zero cloud dependency."
api-interface-design
by TencentBlueKing
API 接口设计规范，涵盖 RESTful 设计原则、URL 命名、HTTP 方法选择、请求响应格式、错误码定义、版本控制。当用户设计 API 接口、定义 Resource 类、编写接口文档或进行接口评审时使用。
dart-io
by dartsim
"DART IO: URDF, SDF, MJCF parsers, and dart::io loading"
nextjs15-performance
by srbhr
Next.js 15 critical performance fixes. Use when writing React components, data fetching, Server Actions, or optimizing bundle size.